MirGeneDB 3.0

MirGeneDB ID

Oan-Mir-150

Family name MIR-150 (all species)
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-150
Paralogues
Orthologues Aca-Mir-150  Ami-Mir-150  Bta-Mir-150  Cfa-Mir-150  Cja-Mir-150  Cmi-Mir-150  Cpo-Mir-150  Dno-Mir-150  Dre-Mir-150  Eca-Mir-150  Ete-Mir-150  Gja-Mir-150  Gmo-Mir-150  Hsa-Mir-150  Laf-Mir-150  Lch-Mir-150  Loc-Mir-150  Mal-Mir-150  Mdo-Mir-150  Mml-Mir-150  Mmr-Mir-150  Mmu-Mir-150  Mun-Mir-150  Neu-Mir-150  Ocu-Mir-150  Pab-Mir-150  Pbv-Mir-150  Rno-Mir-150  Sha-Mir-150  Spt-Mir-150  Sto-Mir-150  Tni-Mir-150  Xla-Mir-150-P1  Xla-Mir-150-P2  Xtr-Mir-150 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041737.1: 53402220-53402278 [-]
Seed CUCCCAA
Precursor
(pre-Mir +30nt flank)
UUUCCUGGGCACCCGCCCCUCGGCGCCCCCUCUCCCAACCCUUGUACCAGAGCAUAAACUGAACCCCUGGUACGGGGCCGUGGGAGAGGGGGAGCCGGGGCCCCGCGACCCCCUCCGGA
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Structure
        10          20        30         40        50        
UUUCCUGGGCACCCGCC--       G            AC-|          AGCAUAA 
                   CCUCGGC CCCCCUCUCCCA   CCUUGUACCAG       A
                   GGGGCCG GGGGGAGAGGGU   GGGGCAUGGUC       C
AGGCCUCCCCCAGCGCCCC       A            GCC^          CCCAAGU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce He Ki Te
Mature sequence

Oan-Mir-150_5p

mirBase accessionMIMAT0007090
Sequence
0- UCUCCCAACCCUUGUACCAGAG -22
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Star sequence

Oan-Mir-150_3p*

mirBase accessionMIMAT0007091
Sequence
36- CUGGUACGGGGCCGUGGGAGAGG -59
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