MirGeneDB ID | Oan-Mir-150 |
Family name |
MIR-150 (all species) |
Species |
Platypus (Ornithorhynchus anatinus) |
MiRBase ID |
oan-mir-150
|
Paralogues |
|
Orthologues |
Aca-Mir-150
Ami-Mir-150
Bta-Mir-150
Cfa-Mir-150
Cja-Mir-150
Cmi-Mir-150
Cpo-Mir-150
Dno-Mir-150
Dre-Mir-150
Eca-Mir-150
Ete-Mir-150
Gja-Mir-150
Gmo-Mir-150
Hsa-Mir-150
Laf-Mir-150
Lch-Mir-150
Loc-Mir-150
Mal-Mir-150
Mdo-Mir-150
Mml-Mir-150
Mmr-Mir-150
Mmu-Mir-150
Mun-Mir-150
Neu-Mir-150
Ocu-Mir-150
Pab-Mir-150
Pbv-Mir-150
Rno-Mir-150
Sha-Mir-150
Spt-Mir-150
Sto-Mir-150
Tni-Mir-150
Xla-Mir-150-P1
Xla-Mir-150-P2
Xtr-Mir-150
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Gnathostomata
|
Genome context (mOrnAna1.p.v1_plustraces) |
NC_041737.1: 53402220-53402278 [-]
|
Seed |
CUCCCAA |
Precursor (pre-Mir +30nt flank) |
UUUCCUGGGCACCCGCCCCUCGGCGCCCCCUCUCCCAACCCUUGUACCAGAGCAUAAACUGAACCCCUGGUACGGGGCCGUGGGAGAGGGGGAGCCGGGGCCCCGCGACCCCCUCCGGA
Get precursor sequence
|
Structure | 10 20 30 40 50
UUUCCUGGGCACCCGCC-- G AC-| AGCAUAA
CCUCGGC CCCCCUCUCCCA CCUUGUACCAG A
GGGGCCG GGGGGAGAGGGU GGGGCAUGGUC C
AGGCCUCCCCCAGCGCCCC A GCC^ CCCAAGU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Oan-Mir-150_5p |
mirBase accession | MIMAT0007090 |
Sequence |
0- UCUCCCAACCCUUGUACCAGAG -22
Get sequence
|
Star sequence |
Oan-Mir-150_3p* |
mirBase accession | MIMAT0007091 |
Sequence |
36- CUGGUACGGGGCCGUGGGAGAGG -59
Get sequence
|