MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-150

Family name MIR-150 (all species)
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-150
Paralogues
Orthologues Aca-Mir-150  Ami-Mir-150  Bta-Mir-150  Cfa-Mir-150  Cja-Mir-150  Cmi-Mir-150  Dno-Mir-150  Dre-Mir-150  Eca-Mir-150  Ete-Mir-150  Gja-Mir-150  Gmo-Mir-150  Hsa-Mir-150  Laf-Mir-150  Lch-Mir-150  Loc-Mir-150  Mal-Mir-150  Mdo-Mir-150  Mml-Mir-150  Mmr-Mir-150  Mmu-Mir-150  Mun-Mir-150  Neu-Mir-150  Oan-Mir-150  Ocu-Mir-150  Pab-Mir-150  Pbv-Mir-150  Rno-Mir-150  Sha-Mir-150  Spt-Mir-150  Sto-Mir-150  Tni-Mir-150  Xla-Mir-150-P1  Xla-Mir-150-P2  Xtr-Mir-150 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(cavPor3)		 scaffold_70: 8005631-8005687 [+] UCSC
Seed CUCCCAA
Precursor
(pre-Mir +30nt flank)		 
GGCCACUCCACUUCUCUCCUCACGGCCCUGUCUCCCAACCCUUGUACCAGUGCUGUGCCUCAGACGCUGGUACAGGCCUGGGGGGCAGGGAACUGGGGACUGUGGCACCUGUGGGCC
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Structure
        10          20        30        40        50        
GGCCACUCCACUUCUCU--|    CGG            AC   U         CUGUG 
                   CCUCA   CCCUGUCUCCCA  CCU GUACCAGUG     C
                   GGGGU   GGGACGGGGGGU  GGA CAUGGUCGC     C
CCGGGUGUCCACGGUGUCA^    CAA            CC   -         AGACU 
     110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-150_5p
mirBase accessionMIMAT0047028
Sequence 
0- UCUCCCAACCCUUGUACCAGUG -22
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Star sequence

Cpo-Mir-150_3p* (predicted)
mirBase accessionMIMAT0047029
Sequence 
36- CUGGUACAGGCCUGGGGGGCA -57
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