MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-150

Family name MIR-150 (all species)
Seed CUCCCAA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-150
Paralogues
Orthologues Aca-Mir-150  Ami-Mir-150  Bta-Mir-150  Cfa-Mir-150  Cmi-Mir-150  Cpo-Mir-150  Dre-Mir-150  Ete-Mir-150  Gja-Mir-150  Gmo-Mir-150  Hsa-Mir-150  Lch-Mir-150  Loc-Mir-150  Mal-Mir-150  Mdo-Mir-150  Mml-Mir-150  Mmu-Mir-150  Mun-Mir-150  Oan-Mir-150  Ocu-Mir-150  Pbv-Mir-150  Rno-Mir-150  Sha-Mir-150  Spt-Mir-150  Sto-Mir-150  Tni-Mir-150  Xla-Mir-150-P1  Xla-Mir-150-P2  Xtr-Mir-150 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(dasNov3)
JH571314: 190610-190665 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGCAGCAGCGGCUCUUCCUCGCGGCCCUGUCUCCCAACCCUUGUACCAGUGCUGGCCUCAGACCCUGGUACAGGCCUGGGGGGCAGGGACCCGGGGACCGGGCACCAGCAGGCCA
Get precursor sequence
Structure
        10          20         30        40        50        
AGGCAGCAGCGGCUCUU--|    C  -            AC   U       UGCUGGC 
                   CCUCG GG CCCUGUCUCCCA  CCU GUACCAG       \
                   GGGGC CC GGGACGGGGGGU  GGA CAUGGUC       C
ACCGGACGACCACGGGCCA^    -  A            CC   -       CCAGACU 
    110       100         90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Dno-Mir-150_5p

mirBase accessionMIMAT0047675
Sequence
0- UCUCCCAACCCUUGUACCAGUG -22
Get sequence
Star sequence

Dno-Mir-150_3p* (predicted)

mirBase accessionMIMAT0047676
Sequence
35- CUGGUACAGGCCUGGGGGGCA -56
Get sequence