| MirGeneDB ID | Mml-Mir-7180 |
|---|
| Family name |
MIR-7180 (all species) |
|---|
| Species |
Rhesus monkey (Macaca mulatta) |
|---|
| MiRBase ID |
mml-mir-7180
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-7180
Cfa-Mir-7180
Cja-Mir-7180
Dno-Mir-7180
Ocu-Mir-7180
Pab-Mir-7180
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014336.1: 4061811-4061868 [-]
UCSC
Ensembl
|
|---|
| Seed |
GGCCUCU |
|---|
Precursor
(pre-Mir +30nt flank) |
CAGAGGCUCUGAGGAUUGGUGGUUUCAGGGAGUGUACUUCCUGAGGCCUCUGGGUAUAAAAUUCCUGUGGCCUCUGGGUGUGUACCCUCUGUGACUUCCAGAUUUGUACGUCCUGCAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAGAGGCUCUGAGGAUU--| U U A U U UCUGGGUAU
GG GGUU CAGGG GUGUAC UCC GAGGCC A
CC UCAG GUCUC CAUGUG GGG CUCCGG A
GACGUCCUGCAUGUUUAGA^ U U C U U UGUCCUUAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Mml-Mir-7180_5p* |
| mirBase accession | MIMAT0028304 |
|---|
| Sequence |
0- AGUGUACUUCCUGAGGCCUCU -21
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mml-miR-7180-5p
|
|---|
| Mature sequence |
Mml-Mir-7180_3p |
| mirBase accession | MIMAT0028305 |
|---|
| Sequence |
37- UGGCCUCUGGGUGUGUACCCU -58
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mml-miR-7180-3p
|
|---|
