Mir-362-P3b

MirGeneDB ID

Hsa-Mir-362-P3b

Family name

MIR-362 (all species)

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-500b

Paralogues

Hsa-Mir-362-P3a-v1 Hsa-Mir-362-P4 Hsa-Mir-362-P5 Hsa-Mir-362-P6

Orthologues

Bta-Mir-362-P3b-v1 Cfa-Mir-362-P3b Cpo-Mir-362-P3b Dno-Mir-362-P3b Eca-Mir-362-P3b-v1 Mml-Mir-362-P3b Mmr-Mir-362-P3b-v1 Pab-Mir-362-P3b

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(hg38)

chrX: 50010681-50010742 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-362-P3b)

Mir-188-P1 chrX: 50003167-50003225 [+] UCSC Ensembl
Mir-188-P2 chrX: 50003517-50003576 [+] UCSC Ensembl
Mir-362-P3a-v1 chrX: 50008443-50008504 [+] UCSC Ensembl
Mir-362-P3a-v2 chrX: 50008443-50008504 [+] UCSC Ensembl
Mir-362-P4 chrX: 50008968-50009026 [+] UCSC Ensembl
Mir-362-P5 chrX: 50009735-50009794 [+] UCSC Ensembl
Mir-362-P3b chrX: 50010681-50010742 [+] UCSC Ensembl
Mir-188-P3 chrX: 50013256-50013314 [+] UCSC Ensembl
Mir-362-P6 chrX: 50014612-50014671 [+] UCSC Ensembl

Seed

AAUCCUU

Precursor
(pre-Mir +30nt flank)

CUGGAAUCUCCUGUCCUGGUUCCCCCUCUCUAAUCCUUGCUACCUGGGUGAGAGUGCUUUCUGAAUGCAGUGCACCCAGGCAAGGAUUCUGCAAGGGGGAGUGACAUCUUCGCAUAGGACAG

Get precursor sequence

Structure

        10          20        30         40        50         60 
CUGGAAUCUCCUGUCCUGG--        CUCU-|        UAC       AGA-  GCUUU 
                     UUCCCCCU     AAUCCUUGC   CUGGGUG    GU     \
                     GAGGGGGA     UUAGGAACG   GACCCAC    CG     C
GACAGGAUACGCUUCUACAGU        ACGUC^        ---       GUGA  UAAGU 
120       110       100        90        80           70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Mature sequence

Hsa-Mir-362-P3b_5p

mirBase accession

MIMAT0016925

Sequence

0- UAAUCCUUGCUACCUGGGUGAGAGU -25

Get sequence

Proposed targets

microrna.org: MIMAT0016925
TargetScanVert: hsa-miR-500b-5p
miRDB: MIMAT0016925

Star sequence

Hsa-Mir-362-P3b_3p*

mirBase accession

MIMAT0027032

Sequence

38- AGUGCACCCAGGCAAGGAUUCUGC -62

Get sequence

Proposed targets

TargetScanVert: hsa-miR-500b-3p
miRDB: MIMAT0027032