MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-1296

Family name MIR-1296 (all species)
Species Human (Homo sapiens)
MiRBase ID hsa-mir-1296
Paralogues
Orthologues Bta-Mir-1296  Cfa-Mir-1296  Cja-Mir-1296  Cpo-Mir-1296  Dno-Mir-1296  Eca-Mir-1296  Ete-Mir-1296  Laf-Mir-1296  Mml-Mir-1296  Mmr-Mir-1296  Ocu-Mir-1296  Pab-Mir-1296 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chr10: 63372969-63373033 [-] UCSC Ensembl
Seed UAGGGCC
Precursor
(pre-Mir +30nt flank)
UGAAAUCAACGAAUCACCUACCUAACUGGGUUAGGGCCCUGGCUCCAUCUCCUUUAGGAAAACCUUCUGUGGGGAGUGGGGCUUCGACCCUAACCCAGGUGGGCUGUAACACUGCUGUGUUUUCU
Get precursor sequence
Structure
        10        20          30        40        50        60  
UGAAAUCAACGAAUCACCUA--|   A           CCCU       U    UUUAGGAAA 
                      CCUA CUGGGUUAGGG    GGCUCCA CUCC         A
                      GGGU GACCCAAUCCC    UCGGGGU GAGG         C
UCUUUUGUGUCGUCACAAUGUC^   G           AGCU       -    GGUGUCUUC 
   120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-1296_5p

mirBase accessionMIMAT0005794
Sequence
0- UUAGGGCCCUGGCUCCAUCUCC -22
Get sequence
Proposed targets microrna.org: MIMAT0005794
TargetScanVert: hsa-miR-1296-5p
miRDB: MIMAT0005794
Star sequence

Hsa-Mir-1296_3p*

mirBase accessionMIMAT0026637
Sequence
44- AGUGGGGCUUCGACCCUAACC -65
Get sequence
Proposed targets TargetScanVert: hsa-miR-1296-3p
miRDB: MIMAT0026637