MirGeneDB 3.0

MirGeneDB ID

Dno-Mir-1296

Family name MIR-1296 (all species)
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-1296
Paralogues
Orthologues Bta-Mir-1296  Cfa-Mir-1296  Cja-Mir-1296  Cpo-Mir-1296  Eca-Mir-1296  Ete-Mir-1296  Hsa-Mir-1296  Laf-Mir-1296  Mml-Mir-1296  Mmr-Mir-1296  Ocu-Mir-1296  Pab-Mir-1296 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH570374: 358225-358289 [-] UCSC Ensembl
Seed UAGGGCC
Precursor
(pre-Mir +30nt flank)
UGAAAUCAACGAAUCACCUACCUAACUGGGUUAGGGCCCUGGCUCCAUCUCCUUUAGGAAAAUCUUCUGUGGGGAGUGGGGUUUCGACCCUAACCCAGCUGGGCUGUAACACUGCUGCAUGUUCU
Get precursor sequence
Structure
        10        20          30        40        50        60  
UGAAAUCAACGAAUCACCUA--|   A           CCCU       U    UUUAGGAAA 
                      CCUA CUGGGUUAGGG    GGCUCCA CUCC         A
                      GGGU GACCCAAUCCC    UUGGGGU GAGG         U
UCUUGUACGUCGUCACAAUGUC^   C           AGCU       -    GGUGUCUUC 
   120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Dno-Mir-1296_5p

mirBase accessionMIMAT0048039
Sequence
0- UUAGGGCCCUGGCUCCAUCUCC -22
Get sequence
Star sequence

Dno-Mir-1296_3p* (predicted)

mirBase accessionMIMAT0048040
Sequence
44- AGUGGGGUUUCGACCCUAACC -65
Get sequence