MirGeneDB 3.0
MirGeneDB ID

Hmi-Mir-29-o5b

Family name MIR-29 (all species)
Species Panther worm (Hofstenia miamia)
MiRBase ID
Paralogues Hmi-Mir-29-o4  Hmi-Mir-29-o5a 
Orthologues Gsp-Mir-29 
Node of Origin (locus) H. miamia
Node of Origin (family) Bilateria
Genome context
(Hofstenia_miamia.HmiaM1.dna.nonchromosomal)		 SCFE01000053.1: 95171-95222 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-29-o5b)		 Mir-29-o5a SCFE01000053.1: 92662-92713 [+] UCSC Ensembl
Mir-29-o5b SCFE01000053.1: 95171-95222 [+] UCSC Ensembl
Seed AGCACCA
Precursor
(pre-Mir +30nt flank)		 
UGUGAUUUAUCAUUUGAUUUAUUUAAGUAACCUGCUUAUAUUUGGUGUACAGAUUUUCUCUAGCACCAAGUAAAAGCGGUUUAUGUUGAAUUACCUCUAUAUGUAAGUUUUU
Get precursor sequence
Structure
        10        20          30        40        50      
UGUGAUUUAUCAUUUGAUUU-      -|   C      A          AC   UU 
                     AUUUAA GUAA CUGCUU UAUUUGGUGU  AGA  \
                     UAAGUU UAUU GGCGAA AUGAACCACG  UCU  U
UUUUUGAAUGUAUAUCUCCAU      G^   U      A          A-   CU 
110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
To To
Star sequence

Hmi-Mir-29-o5b_5p*
mirBase accessionNone
Sequence 
0- CCUGCUUAUAUUUGGUGUACAGA -23
Get sequence
Mature sequence

Hmi-Mir-29-o5b_3p
mirBase accessionNone
Sequence 
30- UAGCACCAAGUAAAAGCGGUUU -52
Get sequence