| MirGeneDB ID | Hmi-Mir-29-o4 |
|---|
| Family name |
MIR-29 (all species) |
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| Species |
Panther worm (Hofstenia miamia) |
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| MiRBase ID |
|
|---|
| Paralogues |
Hmi-Mir-29-o5a
Hmi-Mir-29-o5b
|
|---|
| Orthologues |
Gsp-Mir-29
|
|---|
| Node of Origin (locus) |
H. miamia
|
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| Node of Origin (family) |
Bilateria
|
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Genome context
(Hofstenia_miamia.HmiaM1.dna.nonchromosomal) |
SCFE01000363.1: 723590-723644 [+]
UCSC
Ensembl
|
|---|
| Seed |
AGCACCA |
|---|
Precursor
(pre-Mir +30nt flank) |
AGUGGAUAGUUUCUCUAUGAAGAAUAUUUGUCCGGUUUAACAGUGGUGCCUAUAUUUUGUGUAUAGCACCAUGUGAAACCGGUCUCCACCCCUUGGGUAAUCUCAACGUUAGGUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGUGGAUAGUUUCUCUAUG--| AAUAUUUGU A G C UUU
AAG CCGGUUU ACA UGGUGC UAUA \
UUC GGCCAAA UGU ACCACG AUAU U
AUGGAUUGCAACUCUAAUGGG^ CCCACCUCU G - - GUG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Hmi-Mir-29-o4_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UCCGGUUUAACAGUGGUGCCUAUA -24
Get sequence
|
|---|
| Mature sequence |
Hmi-Mir-29-o4_3p |
| mirBase accession | None |
|---|
| Sequence |
33- UAGCACCAUGUGAAACCGGUCU -55
Get sequence
|
|---|
