| MirGeneDB ID | Hme-Mir-970 |
|---|
| Family name |
MIR-970 (all species) |
|---|
| Seed |
CAUAAGA |
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| Species |
Longwing butterfly (Heliconius melpomene) |
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| MiRBase ID |
hme-mir-970
|
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| Paralogues |
|
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| Orthologues |
Aae-Mir-970
Dan-Mir-970
Dme-Mir-970
Dmo-Mir-970
Dsi-Mir-970
Dya-Mir-970
Tca-Mir-970
|
|---|
| Node of Origin (locus) |
Endopterygota
|
|---|
| Node of Origin (family) |
Endopterygota
|
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Genome context
(Hmel_1) |
HE669340: 23237-23299 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GAAGAAGGAAGCGAGUCAGUAAGUAGAGCGAGCCCGGCGUGUGAUCUUAUUGGUAGUGUGGUUGUUAAUCUAUCAUAAGACACACGCGGCUCUCUCUCUUGCGUUAAGACCACGAGUACAACG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GAAGAAGGAAGCGAGUCA---| U C CG A U GUGUGGU
GUAAG AGAG GAGCC GCGUGUG UCUUAU GGUA \
CGUUC UCUC CUCGG CGCACAC AGAAUA CUAU U
GCAACAUGAGCACCAGAAUUG^ - U -- - - CUAAUUG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Hme-Mir-970_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGCCCGGCGUGUGAUCUUAUUGGUA -25
Get sequence
|
|---|
| Mature sequence |
Hme-Mir-970_3p |
| mirBase accession | MIMAT0024997 |
|---|
| Sequence |
42- UCAUAAGACACACGCGGCUCU -63
Get sequence
|
|---|
