| MirGeneDB ID | Gga-Mir-190-P3 |
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| Family name |
MIR-190 (all species) |
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| Seed |
GAUAUGU |
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| Species |
Chicken (Gallus gallus) |
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| MiRBase ID |
gga-mir-190b
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| Paralogues |
Gga-Mir-190-P1
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| Orthologues |
Aae-Mir-190
Aca-Mir-190-P3
Ami-Mir-190-P3
Asu-Mir-190
Bfl-Mir-190
Bge-Mir-190
Bla-Mir-190
Bpl-Mir-190
Bta-Mir-190-P3
Cbr-Mir-190
Cel-Mir-190
Cfa-Mir-190-P3
Cgi-Mir-190
Cmi-Mir-190-P3
Cpi-Mir-190-P3
Cpo-Mir-190-P3
Cte-Mir-190
Dan-Mir-190
Dma-Mir-190
Dme-Mir-190
Dmo-Mir-190
Dno-Mir-190-P3
Dpu-Mir-190
Dre-Mir-190-P3
Dsi-Mir-190
Dya-Mir-190
Esc-Mir-190
Ete-Mir-190-P3
Gja-Mir-190-P3
Gmo-Mir-190-P3
Hme-Mir-190
Hsa-Mir-190-P3
Isc-Mir-190
Lch-Mir-190-P3
Mal-Mir-190-P3
Mdo-Mir-190-P3
Mml-Mir-190-P3
Mmu-Mir-190-P3
Npo-Mir-190
Oan-Mir-190-P3
Obi-Mir-190
Ocu-Mir-190-P3
Ovu-Mir-190
Pbv-Mir-190-P3
Pfl-Mir-190
Pma-Mir-190-o3
Pmi-Mir-190
Rno-Mir-190-P3
Sha-Mir-190-P3
Sko-Mir-190
Spt-Mir-190-P3
Sto-Mir-190-P3
Tca-Mir-190
Tgu-Mir-190-P3
Tni-Mir-190-P3
Xbo-Mir-190
Xla-Mir-190-P3a
Xla-Mir-190-P3b
Xtr-Mir-190-P3
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| Node of Origin (locus) |
Gnathostomata
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| Node of Origin (family) |
Bilateria
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Genome context
(Gallus_gallus.GRCg6a) |
25: 2882988-2883047 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCCCCGGGCCCGUCCCGCCCUGCCUCUGUCUGAUAUGUUUGAUAUUAGGUUGUUUGAUUGGAAACCAACUAAAUAUCAAACAUAUUCUUACAGCGGCAGGGCCUCCCAGCGCCGCGUGCC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GCCCCGGGCCCGUCCCG-- U CU -| A UUUGAU
CCCUGCC CUGU G AUAUGUUUGAUAUU GGUUG \
GGGACGG GACA C UAUACAAACUAUAA UCAAC U
CCGUGCGCCGCGACCCUCC C UU U^ A CAAAGG
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Ad |
Br |
Br |
Ce |
Ce |
Ce |
Ce |
Ch |
He |
He |
Hy |
Hy |
Ki |
Ki |
Li |
Li |
Lu |
Lu |
Ov |
Pr |
Pr |
Sc |
Sc |
Sp |
Sp |
Te |
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| Mature sequence |
Gga-Mir-190-P3_5p |
| mirBase accession | MIMAT0037546 |
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| Sequence |
0- UGAUAUGUUUGAUAUUAGGUUG -22
Get sequence
|
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| Star sequence |
Gga-Mir-190-P3_3p* |
| mirBase accession | MIMAT0037547 |
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| Sequence |
37- ACUAAAUAUCAAACAUAUUCUUA -60
Get sequence
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