MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-342

Family name MIR-342 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-342  Cfa-Mir-342  Cja-Mir-342  Cpo-Mir-342  Dno-Mir-342  Eca-Mir-342  Hsa-Mir-342  Laf-Mir-342  Mml-Mir-342  Mmr-Mir-342  Mmu-Mir-342  Ocu-Mir-342  Pab-Mir-342  Rno-Mir-342 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 83287203-83287269 [-] UCSC
Seed CUCACAC
Precursor
(pre-Mir +30nt flank)		 
CUCUCCAGCCGGCAACCUGGGUUCAAGGUGAGGGGUGCUGUCUGUGAUUGAGGGACAUGGUACAUGGAACUGUCUCACACAGAAAUCGCACCCGUCUCCUUGGCCUGCCUAGCAACACCCCGGCACU
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Structure
        10           20        30        40          50        60   
CUCUCCAGCCGGCAACCU---   U      U  G      UG--|     AU     GACAUGGUA 
                     GGG UCAAGG GA GGGUGC    UCUGUG  UGAGG         \
                     UCC GGUUCC CU CCCACG    AGACAC  ACUCU         C
UCACGGCCCCACAACGAUCCG   -      U  G      CUAA^     --     GUCAAGGUA 
     120       110        100        90        80          70
Deep sequencing
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CommentThere is a second Drosha cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Ete-Mir-342_5p*
mirBase accessionNone
Sequence 
0- AGGGGUGCUGUCUGUGAUUGAGG -23
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Mature sequence

Ete-Mir-342_3p
mirBase accessionNone
Sequence 
42- UCUCACACAGAAAUCGCACCCGUCU -67
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