MirGeneDB 2.1

MirGeneDB ID

Emu-Mir-2017-P2

Family name MIR-2017 (all species)
Seed CCUGUGC
Species Muellers freshwater sponge (Ephydatia muelleri)
MiRBase ID
Paralogues Emu-Mir-2017-P1 
Orthologues Aqu-Mir-2017 
Node of Origin (locus) E. muelleri
Node of Origin (family) Demospongiae
Genome context
(GCA_013339895_Emu)
JABACO010000010.1: 607107-607177 [+]
Precursor
(pre-Mir +30nt flank)
CUGGCCUCCUUGUGGUGUGCACUGGUAAUGAGCACACAGGGCAGAGGUCGUGAUAGAAGGCUCGACAGAGAGCCGUCACUACCUGUGCACCUGUGUGCCCAUUAGCCGGCGCCAUGGGAUUGGACCCUUGG
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Structure
        10         20         30        40         50        60    
CUGGCCUCCUUGUGGUGU-  A    -     A         -|  G    C  GAUAGAAGGCUC 
                   GC CUGG UAAUG GCACACAGG GCA AGGU GU            G
                   CG GGCC AUUAC CGUGUGUCC CGU UCCA CA            A
GGUUCCCAGGUUAGGGUAC  C    G     C         A^  G    U  CUGCCGAGAGAC 
 .       120       110       100        90        80        70
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
 +
Ad Ge Ju
Star sequence

Emu-Mir-2017-P2_5p* (predicted)

mirBase accessionNone
Sequence
0- AGCACACAGGGCAGAGGUCGU -21
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Mature sequence

Emu-Mir-2017-P2_3p (predicted)

mirBase accessionNone
Sequence
50- ACCUGUGCACCUGUGUGCCCA -71
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