MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-2686-o2

Family name MIR-2686 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-2686-o1  Efe-Mir-2686-o3 
Orthologues Cte-Mir-2686-P2 
Node of Origin (locus) E. fetida
Node of Origin (family) Sedentaria
Genome context
(Efe_combined)		 Efet.01.406684: 3353-3416 [-]
Seed AGAUGUU
Precursor
(pre-Mir +30nt flank)		 
AUGGUGUUCGUCGUGGUCUGUCGAGUGCUGGGCUUACACUUGGAACGCCUUCUUGUCCUUCGAAAUUCAGGAAGAUGUUCCUAAUGUAGGCUUCUGCGCUUGACAACGGUCUCACGUCCGAUGC
Get precursor sequence
Structure
        10         20         30        40        50        60 
AUGGUGUUCGUCGUGGUC-          U-|        CUU      C     UGUCCUU 
                   UGUCGAGUGC  GGGCUUACA   GGAACG CUUCU       C
                   ACAGUUCGCG  UUCGGAUGU   CCUUGU GAAGG       G
CGUAGCCUGCACUCUGGCA          UC^        AAU      A     ACUUAAA 
  120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
- +
To
Star sequence

Efe-Mir-2686-o2_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGCUUACACUUGGAACGCCUUCU -23
Get sequence
Mature sequence

Efe-Mir-2686-o2_3p
mirBase accessionNone
Sequence 
41- AAGAUGUUCCUAAUGUAGGCUUC -64
Get sequence