MirGeneDB 2.1
MirGeneDB ID

Efe-Mir-2686-o3

Family name MIR-2686 (all species)
Seed AGAUGUU
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-2686-o1  Efe-Mir-2686-o2 
Orthologues Cte-Mir-2686-P3 
Node of Origin (locus) E. fetida
Node of Origin (family) Annelida
Genome context
(Efe_combined)		 Efet.01.173894: 327-394 [-]
Precursor
(pre-Mir +30nt flank)
GACAGUUGGAAGUGGAAGAUAGAUCAUGUUGCUUACAUUCUGAACGUCUAAAGGUUUCCUGUUGCAAAUAUCAGGAAGAUGUUCUUAAUGUAGGCUUCCGUUGUCUGUCGUUGGCGACCUCUUGACCU
Get precursor sequence
Structure
        10          20        30         40        50        60   
GACAGUUGGAAGUGGAA--       C   UU-|        CU        AAAGGUUUCCUGU 
                   GAUAGAU AUG   GCUUACAUU  GAACGUCU             \
                   CUGUCUG UGC   CGGAUGUAA  CUUGUAGA             U
UCCAGUUCUCCAGCGGUUG       U   CUU^        UU        AGGACUAUAAACG 
      120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Efe-Mir-2686-o3_5p* (predicted)
mirBase accessionNone
Sequence 
0- GCUUACAUUCUGAACGUCUAAAGGUU -26
Get sequence
Mature sequence

Efe-Mir-2686-o3_3p
mirBase accessionNone
Sequence 
45- AAGAUGUUCUUAAUGUAGGCUUC -68
Get sequence