MirGeneDB 2.1

MirGeneDB ID

Efe-Mir-2686-o1

Family name MIR-2686 (all species)
Seed AGAUGUU
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-2686-o2  Efe-Mir-2686-o3 
Orthologues Cte-Mir-2686-P1 
Node of Origin (locus) E. fetida
Node of Origin (family) Annelida
Genome context
(Efe_combined)
Efet.01.385486: 2629-2688 [+]
Precursor
(pre-Mir +30nt flank)
ACGAGAUCCCCUUCAAGAGGUCACUGCGGGGCUUAUGUUAUAAACGUCUUCCUUGAUUUAGUAUCGGAAGAUGUUUUUAAUGUAGGCUUCCGCUGUGACACAGUUUCAACACAAUCAUCU
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Structure
        10          20         30        40        50         
ACGAGAUCCCCUUCAAGAG--     U    -|          U           UUGAUU 
                     GUCAC GCGG GGCUUAUGUUA AAACGUCUUCC      \
                     CAGUG CGCC UCGGAUGUAAU UUUGUAGAAGG      U
UCUACUAACACAACUUUGACA     U    U^          U           CUAUGA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Efe-Mir-2686-o1_5p*

mirBase accessionNone
Sequence
0- GCUUAUGUUAUAAACGUCUUCC -22
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Mature sequence

Efe-Mir-2686-o1_3p

mirBase accessionNone
Sequence
37- AAGAUGUUUUUAAUGUAGGCUUC -60
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