MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-10-P2i

Family name MIR-10 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-10-P1  Efe-Mir-10-P2g  Efe-Mir-10-P2h  Efe-Mir-10-P2j  Efe-Mir-10-P2k  Efe-Mir-10-P3g  Efe-Mir-10-P3h  Efe-Mir-10-P3i  Efe-Mir-10-P4a  Efe-Mir-10-P4b  Efe-Mir-10-P4c  Efe-Mir-10-P5a  Efe-Mir-10-P5b  Efe-Mir-10-P6  Efe-Mir-10-P7a  Efe-Mir-10-P7b 
Orthologues Aae-Mir-10-P2  Adi-Mir-10  Aga-Mir-10-P2  Agr-Mir-10-P2  Asp-Mir-10  Bfl-Mir-10-P2-v1  Bge-Mir-10-P2  Bko-Mir-10-P2  Bla-Mir-10-P2-v1  Bpl-Mir-10-P2  Cbr-Mir-10-P2  Cel-Mir-10-P2  Cin-Mir-10-P2  Cte-Mir-10-P2  Dan-Mir-10-P2  Dgr-Mir-10-P2  Dlo-Mir-10-P2  Dma-Mir-10-P2  Dme-Mir-10-P2  Dmo-Mir-10-P2  Dpu-Mir-10-P2  Dsi-Mir-10-P2  Dya-Mir-10-P2  Eba-Mir-10-P2  Gpa-Mir-10-P2  Gsp-Mir-10-P2  Hru-Mir-10-P2  Isc-Mir-10-P2  Lan-Mir-10-P2  Lgi-Mir-10-P2  Lhy-Mir-10-P2  Llo-Mir-10-P2  Mgi-Mir-10-P2  Mom-Mir-10-P2  Npo-Mir-10-P2  Nve-Mir-10  Obi-Mir-10-P2  Ofu-Mir-10-P2  Ovu-Mir-10-P2  Pau-Mir-10-P2  Pca-Mir-10-P2  Pdu-Mir-10-P2  Pfl-Mir-10-P2  Ple-Mir-10-P2  Pmi-Mir-10-P2  Pve-Mir-10-P2  Rph-Mir-10-P2  Sko-Mir-10-P2  Snu-Mir-10-P2  Tca-Mir-10-P2  Tur-Mir-10-P2  Xbo-Mir-10-P2  Xbo-Mir-10-P2-as 
Node of Origin (locus) E. fetida
Node of Origin (family) Eumetazoa
Genome context
(Efe_combined)		 Efet.01.356293: 985-1043 [-]
Seed ACCCGUA
Precursor
(pre-Mir +30nt flank)		 
UGCCGUUGGGAUCGGAAAUUUGGUCAGAUGAACCCGUACAACCGAACUUGUGCUGGCUUUGAAAUCACAAGUCGGUUGUGAUGGGUCUGUUUUGCCAGAGUAUCAGCACUUUCCUACUU
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Structure
        10          20        30         40        50         
UGCCGUUGGGAUCGGAAA--      C    GA      -|       A      CUGGCU 
                    UUUGGU AGAU  ACCCGU ACAACCGA CUUGUG      \
                    AGACCG UUUG  UGGGUA UGUUGGCU GAACAC      U
UUCAUCCUUUCACGACUAUG      U    UC      G^       -      UAAAGU 
       110       100        90        80         70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsNo
Tissue expression
- +
To
Mature sequence

Efe-Mir-10-P2i_5p
mirBase accessionNone
Sequence 
0- AACCCGUACAACCGAACUUGUGC -23
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Star sequence

Efe-Mir-10-P2i_3p*
mirBase accessionNone
Sequence 
36- ACAAGUCGGUUGUGAUGGGUCUG -59
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