MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-488

Family name MIR-488 (all species)
Species Horse (Equus caballus)
MiRBase ID eca-mir-488
Paralogues
Orthologues Bta-Mir-488  Cfa-Mir-488  Cja-Mir-488  Dno-Mir-488  Ete-Mir-488  Hsa-Mir-488  Laf-Mir-488  Mml-Mir-488  Mmr-Mir-488  Mmu-Mir-488  Ocu-Mir-488  Pab-Mir-488  Rno-Mir-488 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009152.1: 12186558-12186616 [-] UCSC Ensembl
Seed UGAAAGG
Precursor
(pre-Mir +30nt flank)		 
UAGAGUGGGAGCUUUCAGAGAAUCAUCUCUCCCAGAUAAUGGCACUCUCAAACAAGUUUCCAAGUUGUUUGAAAGGCUAUUUCUUGGUCAGAAGACUCUCCAUUCCUUCUGGAAGCCUC
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Structure
        10          20        30        40        50          
UAGAGUGGGAGCUUUCA--|   A  A   CU  C   U      A  C      AAGUUU 
                   GAGA UC UCU  CC AGA AAUGGC CU UCAAAC      \
                   CUCU AG AGA  GG UCU UUAUCG GA AGUUUG      C
CUCCGAAGGUCUUCCUUAC^   C  A   CU  U   -      -  A      UUGAAC 
       110       100        90         80         70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-488_5p*
mirBase accessionNone
Sequence 
0- CCCAGAUAAUGGCACUCUCAAAC -23
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Mature sequence

Eca-Mir-488_3p
mirBase accessionMIMAT0012965
Sequence 
38- UUGAAAGGCUAUUUCUUGGUC -59
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