| MirGeneDB ID | Eca-Mir-2483 |
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| Family name |
MIR-2483 (all species) |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-2483
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| Paralogues |
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| Orthologues |
Bta-Mir-2483
Cfa-Mir-2483
Dno-Mir-2483
Ete-Mir-2483
Laf-Mir-2483
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009179.1: 103584119-103584178 [-]
UCSC
Ensembl
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| Seed |
CUGUCAA |
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Precursor
(pre-Mir +30nt flank) |
AGAUGACACCCAAAAAUGUGAGUGAAAAGUUCUGUCAACCAUCCAGCUGUUUGGGGUGAUGCAAACAAACAUCUAGUUGGUUGAGAGAAUUUUUUACUUAGUCUCUGGGUGUUUUGGAGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AGAUGACACCCAAAAAUG--| G UCC C GGGUG
UGAGUGAAAAGUUCU UCAACCA AG UGUUUG A
AUUCAUUUUUUAAGA AGUUGGU UC ACAAAC U
UGAGGUUUUGUGGGUCUCUG^ G UGA U AAACG
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Mature sequence |
Eca-Mir-2483_5p |
| mirBase accession | MIMAT0034700 |
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| Sequence |
0- UCUGUCAACCAUCCAGCUGUUUG -23
Get sequence
|
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| Co-mature sequence |
Eca-Mir-2483_3p |
| mirBase accession | None |
|---|
| Sequence |
37- AACAUCUAGUUGGUUGAGAGAAU -60
Get sequence
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