MirGeneDB 2.1

MirGeneDB ID

Ebu-Mir-26-P7

Family name MIR-26 (all species)
Seed UCAAGUA
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-26-P5  Ebu-Mir-26-P6 
Orthologues
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)
FYBX02010339.1: 270818-270877 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAAGGAUUGUUGAAAUGAACGCAGUCCCAUUCAAGUAAUCCAGGAUAGGUUGUGCCAUGCCUUUCAGCCUGUCCUCGAUUACUUGGAUGGGAAGGCGGUUCAUCUGUGCCAACCCAGUC
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Structure
        10         20         30        40        50         
CAAAGGAUUGUUGAAAU-   -|  AG                C          GUGCCA 
                  GAA CGC  UCCCAUUCAAGUAAUC AGGAUAGGUU      U
                  CUU GCG  AGGGUAGGUUCAUUAG UCCUGUCCGA      G
CUGACCCAACCGUGUCUA   G^  GA                C          CUUUCC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
 +
To
Mature sequence

Ebu-Mir-26-P7_5p

mirBase accessionNone
Sequence
0- UUCAAGUAAUCCAGGAUAGGUU -22
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Star sequence

Ebu-Mir-26-P7_3p*

mirBase accessionNone
Sequence
38- CCUGUCCUCGAUUACUUGGAUG -60
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