MirGeneDB 2.1

MirGeneDB ID

Ebu-Mir-26-P5

Family name MIR-26 (all species)
Seed UCAAGUA
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-26-P6  Ebu-Mir-26-P7 
Orthologues
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)
FYBX02009576.1: 1795671-1795730 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACUGUUUUUCACAUCGGGCUUGGUUCUCGUUCAAGUAAUCCAGGAUAGGCUGUAUGCCUUUGCUAAGCCUGUCCUCGGUUGCUUGGACCAGAUGCAGUCCCUUAGCAGCGUGUCGGAUC
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Structure
        10          20        30        40        50         
GACUGUUUUUCACAUCG--| C   GU   C            C          GUAUGC 
                   GG UUG  UCU GUUCAAGUAAUC AGGAUAGGCU      C
                   CC GAC  AGA CAGGUUCGUUGG UCCUGUCCGA      U
CUAGGCUGUGCGACGAUUC^ U   GU   C            C          AUCGUU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Ebu-Mir-26-P5_5p

mirBase accessionNone
Sequence
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Star sequence

Ebu-Mir-26-P5_3p*

mirBase accessionNone
Sequence
38- CCUGUCCUCGGUUGCUUGGACC -60
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