MirGeneDB 3.0

MirGeneDB ID

Ebu-Mir-26-P6

Family name MIR-26 (all species)
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-26-P5  Ebu-Mir-26-P7 
Orthologues
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)
FYBX02010372.1: 1513076-1513135 [-] UCSC Ensembl
Seed UCAAGUA
Precursor
(pre-Mir +30nt flank)
CUUAUCUCAAACGCGGGGUUGGAAUCCCGGUUCAAGUAAUCCAGGAUAGGCUGUGUGUGUUCAACGGGCCUGUCCUCGAUUGCUUGCUUUGGGUGCAACCUCCUGGGCACCACCAUCAGG
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Structure
        10            20        30        40        50         
CUUAUCUCAAACGCGGG----|   GAAU     UU         C          GUGUGU 
                     GUUG    CCCGG  CAAGUAAUC AGGAUAGGCU      G
                     CAAC    GGGUU  GUUCGUUAG UCCUGUCCGG      U
GGACUACCACCACGGGUCCUC^   GU--     UC         C          GCAACU 
.       110       100          90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
To
Mature sequence

Ebu-Mir-26-P6_5p

mirBase accessionNone
Sequence
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Star sequence

Ebu-Mir-26-P6_3p* (predicted)

mirBase accessionNone
Sequence
38- CCUGUCCUCGAUUGCUUGCUUU -60
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