MirGeneDB ID | Ebu-Mir-26-P6 |
Family name |
MIR-26 (all species) |
Species |
Inshore hagfish (Eptatretus burgeri) |
MiRBase ID |
|
Paralogues |
Ebu-Mir-26-P5
Ebu-Mir-26-P7
|
Orthologues |
|
Node of Origin (locus) |
E. burgeri
|
Node of Origin (family) |
Vertebrata
|
Genome context (Eburgeri_3) |
FYBX02010372.1: 1513076-1513135 [-]
UCSC
Ensembl
|
Seed |
UCAAGUA |
Precursor (pre-Mir +30nt flank) |
CUUAUCUCAAACGCGGGGUUGGAAUCCCGGUUCAAGUAAUCCAGGAUAGGCUGUGUGUGUUCAACGGGCCUGUCCUCGAUUGCUUGCUUUGGGUGCAACCUCCUGGGCACCACCAUCAGG
Get precursor sequence
|
Structure | 10 20 30 40 50
CUUAUCUCAAACGCGGG----| GAAU UU C GUGUGU
GUUG CCCGG CAAGUAAUC AGGAUAGGCU G
CAAC GGGUU GUUCGUUAG UCCUGUCCGG U
GGACUACCACCACGGGUCCUC^ GU-- UC C GCAACU
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Mature sequence |
Ebu-Mir-26-P6_5p |
mirBase accession | None |
Sequence |
0- UUCAAGUAAUCCAGGAUAGGCU -22
Get sequence
|
Star sequence |
Ebu-Mir-26-P6_3p* (predicted) |
mirBase accession | None |
Sequence |
38- CCUGUCCUCGAUUGCUUGCUUU -60
Get sequence
|