| MirGeneDB ID | Dre-Mir-723-P2 |
|---|
| Family name |
MIR-723 (all species) |
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| Species |
Zebrafish (Danio rerio) |
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| MiRBase ID |
dre-mir-723
|
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| Paralogues |
|
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| Orthologues |
Gmo-Mir-723-P2
Mal-Mir-723-P2
Tni-Mir-723-P2
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| Node of Origin (locus) |
Clupeocephala
|
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| Node of Origin (family) |
Clupeocephala
|
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Genome context
(danRer11) |
chrUn_KN149706v1: 28040-28100 [-]
UCSC
Ensembl
|
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| Seed |
GACAUCA |
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Precursor
(pre-Mir +30nt flank) |
CCCCCAGAAGAAUCACUGCGUAGAGAUAAAGACAGUUUUAAAUGAUGUUACUUUUUUUCAAAUGGAGAAAGACAUCAAUUAAAUCUGUGCUUAUCUCUACAAGCAAGCCAUUGAGAGCCGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCCCCAGAAGAAUCACUGC--| AG U A ACUUUUUUUC
GUAGAGAUAA ACAG UUUAA UGAUGUU \
CAUCUCUAUU UGUC AAAUU ACUACAG A
GGCCGAGAGUUACCGAACGAA^ CG U A AAAGAGGUAA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
| Br |
Br |
Em |
Ey |
Gu |
Gu |
He |
Li |
Li |
Ov |
Te |
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| Star sequence |
Dre-Mir-723-P2_5p* |
| mirBase accession | MIMAT0003750 |
|---|
| Sequence |
0- GACAGUUUUAAAUGAUGUUACU -22
Get sequence
|
|---|
| Mature sequence |
Dre-Mir-723-P2_3p |
| mirBase accession | MIMAT0003751 |
|---|
| Sequence |
39- AGACAUCAAUUAAAUCUGUGCU -61
Get sequence
|
|---|
| Proposed targets |
TargetScanFish: dre-miR-723
|
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