| MirGeneDB ID | Dre-Mir-7133 |
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| Family name |
MIR-7133 (all species) |
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| Species |
Zebrafish (Danio rerio) |
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| MiRBase ID |
dre-mir-7133
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| Paralogues |
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| Orthologues |
Gmo-Mir-7133
Mal-Mir-7133
Tni-Mir-7133
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| Node of Origin (locus) |
Clupeocephala
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| Node of Origin (family) |
Clupeocephala
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Genome context
(danRer11) |
chr8: 10020272-10020332 [+]
UCSC
Ensembl
|
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| Seed |
AGUUUGA |
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Precursor
(pre-Mir +30nt flank) |
GGAUGAAAUGAUAUCAGUGGAGACCUGCUCUGGUGUUGUGUGUUAAACUGUAUUCCUAAACAACAUCUAUAGUUUGAUUCACAGCACAAGAGUUUGCUCUCUGUGUUUCAUCAGGAAAUCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGAUGAAAUGAUAUCAGU- CCU-| G U UUCCUAA
GGAGA GCUCU GUGUUGUG GUUAAACUGUA \
UCUCU UGAGA CACGACAC UAGUUUGAUAU A
CCUAAAGGACUACUUUGUG CGUU^ A U CUACAAC
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Br |
Br |
Em |
Ey |
Gu |
Gu |
He |
Li |
Li |
Ov |
Te |
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| Star sequence |
Dre-Mir-7133_5p* |
| mirBase accession | MIMAT0048664 |
|---|
| Sequence |
0- UGGUGUUGUGUGUUAAACUGUA -22
Get sequence
|
|---|
| Mature sequence |
Dre-Mir-7133_3p |
| mirBase accession | MIMAT0048665 |
|---|
| Sequence |
39- UAGUUUGAUUCACAGCACAAGA -61
Get sequence
|
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