MirGeneDB ID | Mal-Mir-7133 |
Family name |
MIR-7133 (all species) |
Species |
Asian swamp eel (Monopterus albus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Dre-Mir-7133
Gmo-Mir-7133
Tni-Mir-7133
|
Node of Origin (locus) |
Clupeocephala
|
Node of Origin (family) |
Clupeocephala
|
Genome context (GCA_001952655.1_M_albus_1.0_genomic) |
KV884885.1: 435651-435713 [-]
UCSC
Ensembl
|
Seed |
AUGUUGA |
Precursor (pre-Mir +30nt flank) |
CUGAGACGCCCAGGCUUUGGAAAUGGCUCAGAUGUUGAGUAUCAAACUGUAUGUUAUAUAUGUCAUGUAUAUAGUUUGAUACACAGCACAACAAGCCGUUUUCUUCACAAGGCAUCGUUUGUA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CUGAGACGCCCAGGCUUU-- CAGA-| A GUUAUAU
GGAAAUGGCU UGUUG GUAUCAAACUGUAU A
CUUUUGCCGA ACGAC CAUAGUUUGAUAUA U
AUGUUUGCUACGGAACACUU ACAAC^ A UGUACUG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Mal-Mir-7133_5p |
mirBase accession | None |
Sequence |
0- GAUGUUGAGUAUCAAACUGUAU -22
Get sequence
|
Star sequence |
Mal-Mir-7133_3p* |
mirBase accession | None |
Sequence |
41- UAGUUUGAUACACAGCACAACA -63
Get sequence
|