MirGeneDB 3.0
MirGeneDB ID

Dno-Mir-383

Family name MIR-383 (all species)
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-383
Paralogues Dno-Mir-383-v1 
Orthologues Mun-Mir-383  Spt-Mir-383 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(dasNov3)		 JH564670: 1798893-1798955 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-383-v2)		 Mir-383-v1 JH564670: 1798893-1798954 [-] UCSC Ensembl
Mir-383-v2 JH564670: 1798893-1798955 [-] UCSC Ensembl
Variant

Dno-Mir-383-v2
Seed AGAUCAG
Precursor
(pre-Mir +30nt flank)		 
CACUUGAGAAUCUCCUCGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGGGUGGAUACUAAUCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUCCUAGCCCUUAACCUCUU
Get precursor sequence
Structure
        10        20         30        40        50        60  
CACUUGAGAAUCUCCUCGU   C     C-| A      AA    A        UUGGGUGG 
                   CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
UUCUCCAAUUCCCGAUCCU   A     AA^ A      CG    -        CUAAUCAU 
 120       110       100        90        80         70
Deep sequencing
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CommentThere are not enough 3p reads to reliably assess whether this is a Group 2 miRNA, but this version is a Group 2 in other taxa where it can be assessed.
3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Mature sequence

Dno-Mir-383-v2_5p
mirBase accessionMIMAT0047868
Sequence 
0- CAGAUCAGAAGGUGAUUGUGGCU -23
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Star sequence

Dno-Mir-383-v2_3p*
mirBase accessionMIMAT0047869
Sequence 
42- CCACAGCACUGCCUGGUCAGA -63
Get sequence
Variant

Dno-Mir-383-v1
Seed GAUCAGA
Precursor
(pre-Mir +30nt flank)		 
ACUUGAGAAUCUCCUCGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGGGUGGAUACUAAUCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUCCUAGCCCUUAACCUCUU
Get precursor sequence
Structure
        10         20         30        40        50        60 
ACUUGAGAAUCUCCUCGU-   C     C-| A      AA    A        UUGGGUGG 
                   CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
UUCUCCAAUUCCCGAUCCU   A     AA^ A      CG    -        CUAAUCAU 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Mature sequence

Dno-Mir-383-v1_5p
mirBase accessionMIMAT0047868
Sequence 
0- AGAUCAGAAGGUGAUUGUGGCU -22
Get sequence
Star sequence

Dno-Mir-383-v1_3p*
mirBase accessionMIMAT0047869
Sequence 
41- CCACAGCACUGCCUGGUCAGA -62
Get sequence