MirGeneDB 3.0

MirGeneDB ID

Cli-Mir-1781

Family name MIR-1781 (all species)
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-1781
Paralogues
Orthologues Gga-Mir-1781  Tgu-Mir-1781 
Node of Origin (locus) Neognathae
Node of Origin (family) Neognathae
Genome context
(colLiv2)
scaffold146: 3197333-3197391 [+]
Seed UUAAAUC
Precursor
(pre-Mir +30nt flank)
AGUAGGAAAGGCAAGACAAGGAGCUUGUUUAACAGCUGAGUGAUUUAAAGCAAUCAAAUUCCUUUAGCUUUAAAUCAUCCAGCUGUUGAACAGGCUCUUGCUUCAUUUCUCCCAAGUCC
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Structure
        10          20        30        40        50         
AGUAGGAAAGGCAAGACA--|                   AG           AAUCAAA 
                    AGGAGCUUGUUUAACAGCUG  UGAUUUAAAGC       \
                    UUCUCGGACAAGUUGUCGAC  ACUAAAUUUCG       U
CCUGAACCCUCUUUACUUCG^                   CU           AUUUCCU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Li Mi Ov Pe Te To
Star sequence

Cli-Mir-1781_5p* (predicted)

mirBase accessionNone
Sequence
0- AACAGCUGAGUGAUUUAAAGC -21
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Mature sequence

Cli-Mir-1781_3p

mirBase accessionMIMAT0038697
Sequence
38- UUUAAAUCAUCCAGCUGUUGA -59
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