MirGeneDB 2.1

MirGeneDB ID

Cli-Mir-1467

Family name MIR-1467 (all species)
Seed UCACACC
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-1467
Paralogues
Orthologues Gga-Mir-1467  Tgu-Mir-1467 
Node of Origin (locus) Neognathae
Node of Origin (family) Neognathae
Genome context
(colLiv2)
scaffold216: 4187745-4187809 [-]
Precursor
(pre-Mir +30nt flank)
UGAAGGAAAAACCGACAGGGCAGGUUUUUCUCUCAGCUACGUCGGUGUAAAUCCAGAGCAACUCCACUGAGAUUCACACCAGAGUAACUGAGAGCAGAAUCUGGCCAACAUCAUCCACCUGACCU
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Structure
        10          20        30        40         50        60  
UGAAGGAAAAACCGACA--| G        U       C   G  -     A    CAGAGCAA 
                   GG CAGGUUUU CUCUCAG UAC UC GGUGU AAUC        \
                   CC GUCUAAGA GAGAGUC AUG AG CCACA UUAG        C
UCCAGUCCACCUACUACAA^ G        C       A   -  A     C    AGUCACCU 
   120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Cl Cl Cl Cl Cl To
Star sequence

Cli-Mir-1467_5p*

mirBase accessionMIMAT0038680
Sequence
0- UCUCAGCUACGUCGGUGUAAAUC -23
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Mature sequence

Cli-Mir-1467_3p

mirBase accessionMIMAT0038681
Sequence
42- UUCACACCAGAGUAACUGAGAGC -65
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