| MirGeneDB ID | Tgu-Mir-1467 |
|---|
| Family name |
MIR-1467 (all species) |
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| Species |
Zebra finch (Taeniopygia guttata) |
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| MiRBase ID |
tgu-mir-1467-1
|
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| Paralogues |
|
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| Orthologues |
Cli-Mir-1467
Gga-Mir-1467
|
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| Node of Origin (locus) |
Neognathae
|
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| Node of Origin (family) |
Neognathae
|
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Genome context
(TaeGut1_add) |
2: 137325683-137325747 [-]
UCSC
Ensembl
|
|---|
| Seed |
UCACACC |
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Precursor
(pre-Mir +30nt flank) |
AAGAAGGAAAACUGACAGGGCAGGUUUUUUUCUCAGCUACAUCGGUGUAAAUCCAGAGCAACUCCACUGAGAUUCACACCAGAGUAACUGAGAGCAGAAUCUGGCCAACAUCAUCCACCUGACCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAGAAGGAAAACUGACA--| G U C A - A CAGAGCAA
GG CAGGUUUU UUCUCAG UAC UC GGUGU AAUC \
CC GUCUAAGA GAGAGUC AUG AG CCACA UUAG C
UCCAGUCCACCUACUACAA^ G C A - A C AGUCACCU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Tgu-Mir-1467_5p* |
| mirBase accession | MIMAT0025399 |
|---|
| Sequence |
0- UCUCAGCUACAUCGGUGUAAAUC -23
Get sequence
|
|---|
| Mature sequence |
Tgu-Mir-1467_3p |
| mirBase accession | MIMAT0027342 |
|---|
| Sequence |
42- UUCACACCAGAGUAACUGAGAGC -65
Get sequence
|
|---|
