MirGeneDB 2.1
MirGeneDB ID

Cel-Mir-392-v2

Family name MIR-392 (all species)
Seed AUCAUCG
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-392
Paralogues Cel-Mir-392-v1 
Orthologues Cbr-Mir-392 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)		 chrX: 13597261-13597319 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-392-v2)		 Mir-392-v1 chrX: 13597261-13597319 [+] UCSC Ensembl
Mir-392-v2 chrX: 13597261-13597319 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUUGAAAAUCUCGCAGACGUGUUCAGUCAGCAUUCGUGGUUGAGGAUAUCGAACACAAAAAAAGAUAUCAUCGAUCACGUGUGAUGACAGAUUUUCUGCGACUAACAGGUUUGCUUA
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Structure
        10        20          30        40        50         
UUUUUGAAAAUCUCGCAGACGUGUUCA--|   G   U         G      GAACAC 
                             GUCA CAU CGUGGUUGA GAUAUC      \
                             CAGU GUG GCACUAGCU CUAUAG      A
AUUCGUUUGGACAAUCAGCGUCUUUUAGA^   A   U         A      AAAAAA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Wt Da Ea Mi Yo Yo
Star sequence

Cel-Mir-392-v2_5p*
mirBase accessionMIMAT0020344
Sequence 
0- AGCAUUCGUGGUUGAGGAUAUC -22
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Mature sequence

Cel-Mir-392-v2_3p
mirBase accessionMIMAT0000768
Sequence 
37- UAUCAUCGAUCACGUGUGAUGA -59
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Proposed targets microrna.org: MIMAT0000768
TargetScanWorm: cel-miR-392