MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-246

Family name MIR-246 (all species)
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-246
Paralogues
Orthologues Cbr-Mir-246 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)		 chrIV: 10940152-10940215 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-246)		 Mir-2210 chrIV: 10914618-10914678 [+] UCSC Ensembl
Mir-246 chrIV: 10940152-10940215 [+] UCSC Ensembl
Seed UACAUGU
Precursor
(pre-Mir +30nt flank)		 
ACAAUAUUCAGCAUCUGAAUUAUAAAACAUCGCCUAACCGUUGUCAUGUAAUAUUUCCCAGAGAAAAUGAUAUUACAUGUUUCGGGUAGGAGCUGUUCAAACUUUGGACAUUGGCAUCUCUUAU
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Structure
        10        20          30        40        50        60  
ACAAUAUUCAGCAUCUGAAUUAUAA--|   UCG    A   UUGU         UUUCCCAG 
                           AACA   CCUA CCG    CAUGUAAUA        \
                           UUGU   GGAU GGC    GUACAUUAU        A
UAUUCUCUACGGUUACAGGUUUCAAAC^   CGA    G   UUU-         AGUAAAAG 
  120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-246_5p*
mirBase accessionMIMAT0020337
Sequence 
0- CGCCUAACCGUUGUCAUGUAAUA -23
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Mature sequence

Cel-Mir-246_3p
mirBase accessionMIMAT0000302
Sequence 
42- UUACAUGUUUCGGGUAGGAGCU -64
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Proposed targets microrna.org: MIMAT0000302
TargetScanWorm: cel-miR-246