MirGeneDB 3.0

MirGeneDB ID

Cbr-Mir-230

Family name MIR-230 (all species)
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-230
Paralogues
Orthologues Cel-Mir-230 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(CB4)
X: 11132721-11132785 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-230)
Mir-230 X: 11132721-11132785 [+] Ensembl
Mir-7580-P2 X: 11135472-11135533 [-] Ensembl
Mir-7580-P1 X: 11141279-11141340 [+] Ensembl
Mir-791 X: 11146148-11146211 [+] Ensembl
Seed CUUGGUC
Precursor
(pre-Mir +30nt flank)
GUUUCUCAUAUAAUAAAAUGCCUUACCGAUACUUGGUCGACAAUUUAAUAGUAUCUGAUUAAUUGAUGGAUAGUAUUAGUUGUGCGACCAGGAAAUGGUAUGAGCAUUUCAAUUUGAAGAAAUUC
Get precursor sequence
Structure
        10         20         30         40        50        60  
GUUUCUCAUAUAAUAAA-    CU-     AUA        -|     U    G  UCUGAUUA 
                  AUGC   UACCG   CUUGGUCG ACAAUU AAUA UA        \
                  UACG   AUGGU   GGACCAGC UGUUGA UUAU AU        A
CUUAAAGAAGUUUAACUU    AGU     AAA        G^     -    G  AGGUAGUU 
   120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Mature sequence

Cbr-Mir-230_5p

mirBase accessionNone
Sequence
0- ACUUGGUCGACAAUUUAAUAGUA -23
Get sequence
Co-mature sequence

Cbr-Mir-230_3p

mirBase accessionMIMAT0000496
Sequence
42- GUAUUAGUUGUGCGACCAGGAAA -65
Get sequence