MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-2-P11

Family name MIR-2 (all species)
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-250
Paralogues Cbr-Mir-2-o3  Cbr-Mir-2-o4 
Orthologues Asu-Mir-2-o11a  Asu-Mir-2-o11b  Asu-Mir-2-o11c  Asu-Mir-2-o11d  Asu-Mir-2-P11  Cel-Mir-2-P11  Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) Chromadorea
Node of Origin (family) Protostomia
Genome context
(CB4)		 V: 9339455-9339515 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P11)		 Mir-2-P11 V: 9339455-9339515 [-] Ensembl
Mir-279-P12 V: 9339608-9339664 [-] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
CUGCUAUUAUUCAAGGGUCUUCGGACCACGCCUUCAGUUGCCUCGUGAUCCGCCGAAUCUGUAAUGGACGAAUCACAGUCAACUGUUGGCACGGUCCUUGAAGUUCACCAUUUUUGAAGGU
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Structure
        10        20          30        40        50        60
CUGCUAUUAUUCAAGGGU    --|    AC   UU      C  C     C  CCGAAUC 
                  CUUC  GGACC  GCC  CAGUUG CU GUGAU CG       U
                  GAAG  CCUGG  CGG  GUCAAC GA CACUA GC       G
UGGAAGUUUUUACCACUU    UU^    CA   UU      U  -     A  AGGUAAU 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Star sequence

Cbr-Mir-2-P11_5p*
mirBase accessionNone
Sequence 
0- CCUUCAGUUGCCUCGUGAUCCG -22
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Mature sequence

Cbr-Mir-2-P11_3p
mirBase accessionMIMAT0000505
Sequence 
40- AAUCACAGUCAACUGUUGGCA -61
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