MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-383-v2

Family name MIR-383 (all species)
Seed AGAUCAG
Species Cow (Bos taurus)
MiRBase ID bta-mir-383
Paralogues Bta-Mir-383-v1 
Orthologues Aca-Mir-383-v2  Ami-Mir-383-v2  Cfa-Mir-383-v2  Cli-Mir-383-v2  Cpi-Mir-383-v2  Cpo-Mir-383-v2  Dno-Mir-383-v2  Ete-Mir-383-v2  Gga-Mir-383-v2  Gja-Mir-383-v2  Hsa-Mir-383-v2  Mdo-Mir-383-v2  Mml-Mir-383-v2  Mmu-Mir-383-v2  Mun-Mir-383  Oan-Mir-383-v2  Ocu-Mir-383-v2  Pbv-Mir-383-v2  Rno-Mir-383-v2  Sha-Mir-383-v2  Spt-Mir-383  Tgu-Mir-383-v2  Xtr-Mir-383-v2 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037354.1: 22249023-22249085 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-383-v2)
Mir-383-v2 NC_037354.1: 22249023-22249085 [+] UCSC Ensembl
Mir-383-v1 NC_037354.1: 22249024-22249085 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACUUCAGAAUCUCCACGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGGGUGGAUAUCAAUCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUCCUAGCCUUUUACCUCAU
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Structure
        10        20         30        40        50        60  
CACUUCAGAAUCUCCACGU   C     C-| A      AA    A        UUGGGUGG 
                   CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
UACUCCAUUUUCCGAUCCU   A     AA^ A      CG    -        CUAACUAU 
 120       110       100        90        80         70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-383-v2_5p

mirBase accessionMIMAT0009309
Sequence
0- CAGAUCAGAAGGUGAUUGUGGCU -23
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Proposed targets TargetScanVert: bta-miR-383
Star sequence

Bta-Mir-383-v2_3p*

mirBase accessionNone
Sequence
42- CCACAGCACUGCCUGGUCAGA -63
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