| MirGeneDB ID | Aae-Mir-92-o55 |
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| Family name |
MIR-92 (all species) |
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| Seed |
AUUGCAC |
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| Species |
Yellow fever mosquito (Aedes aegypti) |
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| MiRBase ID |
aae-mir-92b
|
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| Paralogues |
Aae-Mir-92-o54
|
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| Orthologues |
Asu-Mir-92
Cel-Mir-92
Esc-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
|
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| Node of Origin (locus) |
A. aegypti
|
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| Node of Origin (family) |
Bilateria
|
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Genome context
(Aaeg_L3) |
supercont1.116: 1319161-1319222 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UUGAGCAGGAAAGGUUAGGGCUCCGAAUGUAGGUCGUGACUUGUGCCCGUUUGCUGAAUUUUAAUGGUCAAAUUGCACUUGUCCCGGCCUGCAGCCAAGAGCCAGAGCAUCGCCAACGUUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUGAGCAGGAAAGGUUAG- CGAA-| U UU CC CUGAAUU
GGCUC UGUAGGUCG GAC GUGC GUUUG \
CCGAG ACGUCCGGC CUG CACG UAAAC U
AGUUGCAACCGCUACGAGA AACCG^ C UU U- UGGUAAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | It is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data. |
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Aae-Mir-92-o55_5p* |
| mirBase accession | MIMAT0014321 |
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| Sequence |
0- AGGUCGUGACUUGUGCCCGUUUG -23
Get sequence
|
|---|
| Mature sequence |
Aae-Mir-92-o55_3p |
| mirBase accession | MIMAT0014322 |
|---|
| Sequence |
40- AAUUGCACUUGUCCCGGCCUGC -62
Get sequence
|
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