MirGeneDB 2.1

MirGeneDB ID

Aae-Mir-92-o54

Family name MIR-92 (all species)
Seed AUUGCAC
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-92a
Paralogues Aae-Mir-92-o55 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) A. aegypti
Node of Origin (family) Bilateria
Genome context
(Aaeg_L3)
supercont1.116: 1267213-1267274 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CCCAGUUCUGCCCCCUAUCAAUCUACGCAUCGGUACGGACAGGGGCAACAUUGUGACAUUUGAAAGCUAAUAUUGCACUUGUCCCGGCCUAUGCGUGGAGUUGGCAUUCAGCGUUUACCGGC
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Structure
        10         20         30        40        50        60
CCCAGUUCUGCCCCCUA-    -|        C   AC       G    C   GUGACAU 
                  UCAA UCUACGCAU GGU  GGACAGG GCAA AUU       U
                  GGUU AGGUGCGUA CCG  CCUGUUC CGUU UAA       U
CGGCCAUUUGCGACUUAC    G^        U   GC       A    A   UCGAAAG 
120       110       100        90        80        70
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Fe Fe Fe Fe To To To
Star sequence

Aae-Mir-92-o54_5p*

mirBase accessionMIMAT0015369
Sequence
0- CGGUACGGACAGGGGCAACAUU -22
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Mature sequence

Aae-Mir-92-o54_3p

mirBase accessionMIMAT0014228
Sequence
40- UAUUGCACUUGUCCCGGCCUAU -62
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