MirGeneDB 2.1

6 Latimeria chalumnae microRNA genes with seed AAAGUGC (all species)
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Lch-Mir-17-P1a None MIR-17 AAAGUGC None None JH129267.1 173002 173062 - Gnathostomata Vertebrata Unknown
Lch-Mir-17-P1c None MIR-17 AAAGUGC None None JH126623.1 2113883 2113940 + Gnathostomata Vertebrata Unknown
Lch-Mir-17-P1d None MIR-17 AAAGUGC None None JH128754.1 148690 148752 + Gnathostomata Vertebrata Unknown 1
Lch-Mir-17-P4a None MIR-17 AAAGUGC None None JH129267.1 172558 172616 - Gnathostomata Vertebrata Unknown 1 1
Lch-Mir-17-P4c None MIR-17 AAAGUGC None None JH126623.1 2114536 2114596 + Gnathostomata Vertebrata Unknown 1
Lch-Mir-17-P4d None MIR-17 AAAGUGC None None JH128754.1 150663 150723 + Gnathostomata Vertebrata Unknown 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix