MirGeneDB 3.0

12 Equus caballus microRNA genes with seed GAGGUAG (all species)
Sort by genome coordinates Motifs Tissue expression
- +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Eca-Let-7-P1b eca-let-7e LET-7 GAGGUAG MIMAT0013007 None CM009157.1 21666218 21666284 + Gnathostomata Bilateria No
Eca-Let-7-P1c eca-let-7c LET-7 GAGGUAG MIMAT0013181 None CM009173.1 16009464 16009530 + Gnathostomata Bilateria No 1
Eca-Let-7-P1d eca-let-7a LET-7 GAGGUAG MIMAT0012979 None CM009154.1 30187945 30188011 - Gnathostomata Bilateria No 1
Eca-Let-7-P2a1 None LET-7 GAGGUAG None None CM009170.1 53960138 53960209 - Gnathostomata Bilateria Yes
Eca-Let-7-P2a2 eca-let-7a-2 LET-7 GAGGUAG MIMAT0012979 None CM009175.1 43148194 43148263 + Gnathostomata Bilateria Yes 1
Eca-Let-7-P2a3 None LET-7 GAGGUAG None None CM009179.1 44905230 44905300 + Gnathostomata Bilateria Yes 1
Eca-Let-7-P2b1 eca-let-7f LET-7 GAGGUAG MIMAT0013111 None CM009170.1 53959745 53959821 - Gnathostomata Bilateria Yes 1 1
Eca-Let-7-P2b2 None LET-7 GAGGUAG None None CM009175.1 43149115 43149190 + Gnathostomata Bilateria Yes
Eca-Let-7-P2b3 eca-mir-98 LET-7 GAGGUAG MIMAT0013247 None CM009179.1 44906099 44906177 + Gnathostomata Bilateria Yes 1 1
Eca-Let-7-P2c1 eca-let-7d LET-7 GAGGUAG MIMAT0013110 None CM009170.1 53957806 53957880 - Gnathostomata Bilateria Yes 1
Eca-Let-7-P2c2 None LET-7 GAGGUAG None None CM009153.1 80187889 80187965 + Gnathostomata Bilateria Yes 1
Eca-Let-7-P2c3 eca-let-7g LET-7 GAGGUAG MIMAT0013075 None CM009163.1 36958030 36958107 + Gnathostomata Bilateria Yes 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix