MirGeneDB 3.0

11 Columba livia microRNA genes with seed GAGGUAG (all species)
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MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC Li Mi Ov Pe Te To
Cli-Let-7-P2c3 cli-let-7g LET-7 GAGGUAG MIMAT0038387 MIMAT0038388 scaffold335 757947 758024 - Gnathostomata Bilateria Yes 1
Cli-Let-7-P2c2 cli-let-7i LET-7 GAGGUAG MIMAT0038389 MIMAT0038390 scaffold50 1403722 1403798 - Gnathostomata Bilateria Yes 1
Cli-Let-7-P2c1 cli-let-7d LET-7 GAGGUAG MIMAT0038381 MIMAT0038382 scaffold581 23616 23690 + Gnathostomata Bilateria Yes 1
Cli-Let-7-P2b4 cli-let-7a-4 LET-7 GAGGUAG MIMAT0038374 MIMAT0038377 scaffold454 1197815 1197892 - Gnathostomata Bilateria Yes 1
Cli-Let-7-P2b2 cli-let-7b LET-7 GAGGUAG None MIMAT0038378 scaffold383 359902 359978 - Gnathostomata Bilateria Yes 1
Cli-Let-7-P2b1 cli-let-7f LET-7 GAGGUAG MIMAT0038385 MIMAT0038386 scaffold581 22616 22692 + Gnathostomata Bilateria Yes 1
Cli-Let-7-P2a4 cli-let-7e LET-7 GAGGUAG MIMAT0038383 MIMAT0038384 scaffold454 1198025 1198095 - Gnathostomata Bilateria Yes 1
Cli-Let-7-P2a2 cli-let-7a-3 LET-7 GAGGUAG MIMAT0038374 MIMAT0038375 scaffold383 360766 360836 - Gnathostomata Bilateria Yes
Cli-Let-7-P2a1 cli-let-7a-1 LET-7 GAGGUAG MIMAT0038374 MIMAT0038375 scaffold581 22176 22247 + Gnathostomata Bilateria Yes 1
Cli-Let-7-P1d cli-let-7a-2 LET-7 GAGGUAG MIMAT0038374 MIMAT0038376 scaffold367 862707 862773 - Gnathostomata Bilateria No 1
Cli-Let-7-P1c cli-let-7c LET-7 GAGGUAG MIMAT0038379 MIMAT0038380 scaffold101 18430669 18430735 + Gnathostomata Bilateria No 1

(red - mature/co-mature, blue - star)

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