| MirGeneDB ID | Sha-Novel-2-P1a |
|---|---|
| Family name | SHA-NOVEL-2 (all species) |
| Species | Tasmanian devil (Sarcophilus harrisii) |
| MiRBase ID | |
| Paralogues | Sha-Novel-2-P1b Sha-Novel-2-P2 Sha-Novel-2-P3 Sha-Novel-2-P4 Sha-Novel-2-P5a Sha-Novel-2-P5b |
| Orthologues | |
| Node of Origin (locus) | S. harrisii |
| Node of Origin (family) | S. harrisii |
| Genome context (DEVIL_add) |
|
| Seed | UUCCCAA |
| Precursor (pre-Mir +30nt flank) |
AGUGCCCAGUGUUUGAAAAAGAAAAGGAAUCCUCUUAGUCCACUUUCCCAAAACUAGGCACCGAGet precursor sequence |
| Structure | 10 20 30 A--| C G AA AAAA AUCC GUGCC AGU UUUG AAAG GGA U CACGG UCA AAAC UUUC CCU C AGC^ A - CC A--- GAUU 60 50 40 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Sha-Novel-2-P1a_5p* |
| mirBase accession | None |
| Sequence |
0- AGUGCCCAGUGUUUGAAAAAGA -22
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|
| Mature sequence | Sha-Novel-2-P1a_3p |
| mirBase accession | None |
| Sequence |
43- UUUCCCAAAACUAGGCACCGA -64
Get sequence
|
