MirGeneDB 3.0
MirGeneDB ID

Pmi-Mir-2011

Family name MIR-2011 (all species)
Species Bat starfish (Patiria miniata)
MiRBase ID pmi-mir-2011
Paralogues
Orthologues Pfl-Mir-2011  Sko-Mir-2011  Spu-Mir-2011 
Node of Origin (locus) Ambulacraria
Node of Origin (family) Ambulacraria
Genome context
(Pmin1)		 JH780600.1: 59500-59563 [+]
Seed CAAGGUG
Precursor
(pre-Mir +30nt flank)		 
AUUCACCCCAGCACAUAGACUUGUGCGGUGCAGUCACUAUCACACCUUAGGUGUGUCAGUAUUUCCAGGUCACCAAGGUGUGUUAGUGAUGACACUGCGCAAAGUCCCUCACAACAGGCCCAAU
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Structure
        10         20         30        40        50        60  
AUUCACCCCAGCACAUA-   -|         CA       U        A    UGUCAGUA 
                  GAC UUGUGCGGUG  GUCACUA CACACCUU GGUG        \
                  CUG AACGCGUCAC  UAGUGAU GUGUGGAA CCAC        U
UAACCCGGACAACACUCC   A^         AG       U        -    UGGACCUU 
  120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
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Star sequence

Pmi-Mir-2011_5p*
mirBase accessionMIMAT0032185
Sequence 
0- CAGUCACUAUCACACCUUAGGUG -23
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Mature sequence

Pmi-Mir-2011_3p
mirBase accessionMIMAT0032186
Sequence 
42- CCAAGGUGUGUUAGUGAUGACA -64
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