MirGeneDB 3.0
MirGeneDB ID

Pmi-Mir-2007

Family name MIR-2007 (all species)
Species Bat starfish (Patiria miniata)
MiRBase ID pmi-mir-2007
Paralogues
Orthologues Pfl-Mir-2007  Sko-Mir-2007  Spu-Mir-2007 
Node of Origin (locus) Ambulacraria
Node of Origin (family) Ambulacraria
Genome context
(Pmin1)		 JH771167.1: 3247-3310 [-]
Seed AUUUCAG
Precursor
(pre-Mir +30nt flank)		 
CCAUCUUGAAUCGCCAUGGCAGCGCUGCUGUAUUUCAGGCGGUAUACUGGUAACAGCUUAUAUGCAGAGUUUACCAGUUACUUCUUGGAAUAUAGGGACGCUUGUCUUAACGCAUCGUUGGAAC
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Structure
        10         20          30        40        50        60  
CCAUCUUGAAUCGCCAU-   -    -| G            C    U        CAGCUUAU 
                  GGC AGCG CU CUGUAUUUCAGG GGUA ACUGGUAA        \
                  CUG UCGC GG GAUAUAAGGUUC UCAU UGACCAUU        A
CAAGGUUGCUACGCAAUU   U    A^ -            U    -        UGAGACGU 
  120       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Em To
Mature sequence

Pmi-Mir-2007_5p
mirBase accessionMIMAT0032181
Sequence 
0- UAUUUCAGGCGGUAUACUGGUAA -23
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Star sequence

Pmi-Mir-2007_3p*
mirBase accessionNone
Sequence 
42- ACCAGUUACUUCUUGGAAUAUA -64
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