| MirGeneDB ID | Pca-Mir-29-o7 |
|---|
| Family name |
MIR-29 (all species) |
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| Species |
Penis worm (Priapulus caudatus) |
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| MiRBase ID |
|
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| Paralogues |
Pca-Mir-29-o6
|
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| Orthologues |
Gsp-Mir-29
|
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| Node of Origin (locus) |
P. caudatus
|
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| Node of Origin (family) |
Bilateria
|
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Genome context
(Priapulus_caudatus_gca000485595v2) |
AXZU02088352.1: 107-163 [+]
UCSC
Ensembl
|
|---|
| Seed |
AGCACCA |
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Precursor
(pre-Mir +30nt flank) |
GGGGGAACCGUCGUGGAAACAUUGUUCAGGACUGAAUUCAUGUGGAGCAAAGGUCGCCCUAAUUCUAGCACCAUUUGAAUUCAGUUUUGUAUUCAGUGUCUUGUGCAGCAGAAGAUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGGGGAACCGUCGUGGAA UU--| U A AA UCGC
ACAUUG CAGGACUGAAUUCA GUGG GC AGG C
UGUGAC GUUUUGACUUAAGU UACC CG UCU C
GUAGAAGACGACGUGUUC UUAU^ U A A- UAAU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Pca-Mir-29-o7_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- ACUGAAUUCAUGUGGAGCAAAGG -23
Get sequence
|
|---|
| Mature sequence |
Pca-Mir-29-o7_3p |
| mirBase accession | None |
|---|
| Sequence |
35- UAGCACCAUUUGAAUUCAGUUU -57
Get sequence
|
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