| MirGeneDB ID | Pca-Mir-29-o6 |
|---|
| Family name |
MIR-29 (all species) |
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| Species |
Penis worm (Priapulus caudatus) |
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| MiRBase ID |
|
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| Paralogues |
Pca-Mir-29-o7
|
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| Orthologues |
Gsp-Mir-29
|
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| Node of Origin (locus) |
P. caudatus
|
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| Node of Origin (family) |
Bilateria
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Genome context
(Priapulus_caudatus_gca000485595v2) |
KQ717034.1: 31025-31084 [-]
UCSC
Ensembl
|
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| Seed |
AGCACCA |
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Precursor
(pre-Mir +30nt flank) |
UUUCACCUACGAUUCUAGGCACCGCUGAGGCCUGGUAUCAAAUGGUGGAUAGAUGCUCACAAAUGUUCUAGCACCAUUUGAAAUCAGUGCCGCCGCGGUCGCCAUGGCAACAGUGAUGAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUCACCUACGAUUCUAG - UGA -| A GA UGCUCA
GC ACCGC GGC CUGGU UCAAAUGGUG UAGA \
CG UGGCG CCG GACUA AGUUUACCAC AUCU C
CAGUAGUGACAACGGUAC C CCG U^ A G- UGUAAA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Pca-Mir-29-o6_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- CCUGGUAUCAAAUGGUGGAUAGA -23
Get sequence
|
|---|
| Mature sequence |
Pca-Mir-29-o6_3p |
| mirBase accession | None |
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| Sequence |
38- UAGCACCAUUUGAAAUCAGUGC -60
Get sequence
|
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