MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-885

Family name MIR-885 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-885  Cfa-Mir-885  Cja-Mir-885  Dno-Mir-885  Eca-Mir-885  Hsa-Mir-885  Laf-Mir-885  Mml-Mir-885  Mmr-Mir-885  Ocu-Mir-885 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM068843.1: 68359523-68359576 [+] UCSC Ensembl
Seed GGCAGCG
Precursor
(pre-Mir +30nt flank)		 
GGCCCAGUCUGCUACUCGGCCCGCACUCUCUCCAUUACACUACCCUGCCUCUUCUCCAUGAGAGGCAGCGGGGUGUAGUGGAUAGAGCACGGGUUCAAGUCCCGGCUCCACCAC
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Structure
        10          20        30        40         50      
GGCCCAGUCUGCUACUC--|     CA    C           A  -        UCU 
                   GGCCCG  CUCU UCCAUUACACU CC CUGCCUCU   C
                   UUGGGC  GAGA AGGUGAUGUGG GG GACGGAGA   C
CACCACCUCGGCCCUGAAC^     AC    U           -  C        GUA 
  110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Br Br Li Li
Star sequence

Pab-Mir-885_5p*
mirBase accessionNone
Sequence 
0- UCCAUUACACUACCCUGCCUCU -22
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Mature sequence

Pab-Mir-885_3p
mirBase accessionNone
Sequence 
32- AGGCAGCGGGGUGUAGUGGAUA -54
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