MirGeneDB ID | Dno-Mir-885 |
Family name |
MIR-885 (all species) |
Seed |
CCAUUAC |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-885
|
Paralogues |
|
Orthologues |
Bta-Mir-885
Cfa-Mir-885
Cpo-Mir-885
Hsa-Mir-885
Mml-Mir-885
Ocu-Mir-885
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (dasNov3) |
JH570235: 996212-996265 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GCCCAAGGCUGCCGCUCGGCCCACACUCUCUCCAUUACACUACCCUGCCUCUUCUCCACGAGAGGCAGCUGGGUGUAGCGGAUAGAGCACGGGUUCAAGUCCCAGCUCCACCGC
Get precursor sequence
|
Structure | 10 20 30 40 50
GCCCAAGGCUGCCGCUC--| ACA C A ACC UCU
GGCCC CUCU UCC UUACACU CUGCCUCU C
UUGGG GAGA AGG GAUGUGG GACGGAGA C
CGCCACCUCGACCCUGAAC^ CAC U C GUC GCA
110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Dno-Mir-885_5p |
mirBase accession | MIMAT0048020 |
Sequence |
0- UCCAUUACACUACCCUGCCUCU -22
Get sequence
|
Star sequence |
Dno-Mir-885_3p* (predicted) |
mirBase accession | MIMAT0048021 |
Sequence |
32- AGGCAGCUGGGUGUAGCGGAUA -54
Get sequence
|