MirGeneDB 2.1

MirGeneDB ID

Ocu-Mir-676

Family name MIR-676 (all species)
Seed CGUCCUA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-676
Paralogues
Orthologues Cfa-Mir-676  Cpo-Mir-676  Dno-Mir-676  Hsa-Mir-676  Mml-Mir-676  Mmu-Mir-676  Rno-Mir-676 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)
chrX: 48575161-48575217 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCAUCUCCGAGCCUCACCUGAAUGUGUGACUCUUCAACCUCAGGACUUGCAGAACUAAGAGAGUGCCGUCCUAAGGUUGUUGAGUUGUGCAUUUCAGGGCAUGUCAUCUCUAUGGA
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Structure
        10         20         30        40        50        
UGCAUCUCCGAGCCUCA-    -|     UG    UU      C     UU   GAACU 
                  CCUG AAUGUG  ACUC  CAACCU AGGAC  GCA     A
                  GGAC UUACGU  UGAG  GUUGGA UCCUG  CGU     A
AGGUAUCUCUACUGUACG    U^     GU    UU      A     C-   GAGAG 
     110       100        90        80        70         60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
 +
He Ki Te To Wh
Star sequence

Ocu-Mir-676_5p*

mirBase accessionMIMAT0048559
Sequence
0- CUCUUCAACCUCAGGACUUGCA -22
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Mature sequence

Ocu-Mir-676_3p

mirBase accessionMIMAT0048560
Sequence
36- CCGUCCUAAGGUUGUUGAGUU -57
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