| MirGeneDB ID | Eca-Mir-676 |
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| Family name |
MIR-676 (all species) |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-676
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| Paralogues |
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| Orthologues |
Cfa-Mir-676
Cja-Mir-676
Cpo-Mir-676
Dno-Mir-676
Hsa-Mir-676
Laf-Mir-676
Mml-Mir-676
Mmr-Mir-676
Mmu-Mir-676
Ocu-Mir-676
Pab-Mir-676
Rno-Mir-676
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009179.1: 55035839-55035895 [+]
UCSC
Ensembl
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| Seed |
CGUCCUA |
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Precursor
(pre-Mir +30nt flank) |
UUCAUGUUGGUUCCUCACCAGAAUGCAUGACUCUUCAAUCUCGGGACUCGCAGAAUUAAUGGAAUGCCGUCCUAAGGUUGUUGAGUUCUGCGUUUCUGGGCAUUUCAUCUCUGUGGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUCAUGUUGGUUCCUCA- -| U UU CG UC GAAUU
CCAG AAUGCA GACUC CAAUCU GGAC GCA A
GGUC UUGCGU UUGAG GUUGGA CCUG CGU A
GGGUGUCUCUACUUUACG U^ C UU AU C- AAGGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Star sequence |
Eca-Mir-676_5p* |
| mirBase accession | None |
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| Sequence |
0- CUCUUCAAUCUCGGGACUCGCA -22
Get sequence
|
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| Mature sequence |
Eca-Mir-676_3p |
| mirBase accession | MIMAT0034705 |
|---|
| Sequence |
36- CCGUCCUAAGGUUGUUGAGUU -57
Get sequence
|
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