| MirGeneDB ID | Ocu-Mir-615 |
|---|
| Family name |
MIR-615 (all species) |
|---|
| Seed |
CCGAGCC |
|---|
| Species |
Rabbit (Oryctolagus cuniculus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
Bta-Mir-615
Cfa-Mir-615
Cpo-Mir-615
Ete-Mir-615
Hsa-Mir-615
Mml-Mir-615
Mmu-Mir-615
Rno-Mir-615
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(oryCun2_add) |
1992045267: 125-188 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AGGCUCCCAGCGACUCGGGAGGGGCGGGAGGGGGGUCCCCGGUGCCCGGACCUGGAGGGUGCUUGCUGUUCGGUCCGAGCCUGGGUCUCCCUCUUCCCCCCACCCCCCCUCAGCCCCUCCGGCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AGGCUCCCAGCGACUCG---| A C UC U C UGGAGGGUG
GG GGGG GGGAGGGGGG CCCGG GC CGGACC \
CC CCCC CCUUCUCCCU GGGUC CG GCCUGG C
CCGGCCUCCCCGACUCCCCC^ A - CU - A CUUGUCGUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | Not in assembly but in trace archive. |
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| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Star sequence |
Ocu-Mir-615_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GGGGGUCCCCGGUGCCCGGACC -22
Get sequence
|
|---|
| Mature sequence |
Ocu-Mir-615_3p |
| mirBase accession | None |
|---|
| Sequence |
43- UCCGAGCCUGGGUCUCCCUCU -64
Get sequence
|
|---|
