MirGeneDB 3.0
MirGeneDB ID

Neu-Novel-2

Family name NEU-NOVEL-2 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) N. eugenii
Node of Origin (family) N. eugenii
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051820.1: 94966100-94966159 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Novel-2)		 Novel-2 CM051820.1: 94966100-94966159 [+] UCSC Ensembl
Mir-12475-o1a CM051820.1: 94978259-94978318 [+] UCSC Ensembl
Mir-12475-o1b CM051820.1: 94987478-94987537 [+] UCSC Ensembl
Mir-12475-o3 CM051820.1: 94990246-94990306 [+] UCSC Ensembl
Mir-12475-o2 CM051820.1: 95012989-95013048 [+] UCSC Ensembl
Seed AUGCGUU
Precursor
(pre-Mir +30nt flank)		 
GGGCUGCAAUUUGAGCUGCUGAGGUAUCACUAUGCGUUCUGAAGACACAUUGUUGUGUGACUGUUUAAACCAUGUGUCUCAGAUCGCAGUGAUCCCUUAGAACACUCAUCAUUUCCUUCC
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Structure
        10          20        30        40        50        60 
GGGCUGCAAUUUGAGCUG--|     U      AU   U     A       U   GUGUGA 
                    CUGAGG AUCACU  GCG UCUGA GACACAU GUU      \
                    GAUUCC UAGUGA  CGC AGACU CUGUGUA CAA      C
CCUUCCUUUACUACUCACAA^     C      --   U     -       C   AUUUGU 
.       110       100        90          80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Novel-2_5p
mirBase accessionNone
Sequence 
0- UAUGCGUUCUGAAGACACAUUGUU -24
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Star sequence

Neu-Novel-2_3p*
mirBase accessionNone
Sequence 
39- CCAUGUGUCUCAGAUCGCAGU -60
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